Gene_name | Experimentally Verified Resistance Gene Information | Predicted Resistance Gene Information |
cmeA | BacMet ID: BAC0068Code for:
EffluxFamily: RND superfamily, MFP familySequence: FASTACross-database IDs: LinkOrganism: Campylobacter jejuniLocation:
ChromosomeCompound: Copper (Cu), Cobalt (Co), Sodium Chenodeoxycholate [class: Acid], Sodium Deoxycholate [class: Acid], Sodium Cholate [class: Acid], Sodium Taurocholate [class: Acid], Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate], Ethidium Bromide [class: Phenanthridine]Description: RND efflux system, a periplasmic fusion protein CmeA. Part of the CmeABC multidrug efflux system in Campylobacter jejuni.Length (amino acid):
367Reference: Lin et al. 2002; Pubmed- 12069964
| Similar
resistance genes in 'BacMet Predicted database' |
cmeB | BacMet ID: BAC0613Code for:
EffluxFamily: RND superfamilySequence: FASTACross-database IDs: LinkOrganism: Campylobacter jejuniLocation:
ChromosomeCompound: Copper (Cu), Cobalt (Co), Sodium Chenodeoxycholate [class: Acid], Sodium Deoxycholate [class: Acid], Sodium Cholate [class: Acid], Sodium Taurocholate [class: Acid], Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate], Ethidium Bromide [class: Phenanthridine], Acridine orange [class: Acridine]Description: An inner membrane efflux transporter. Part of the CmeABC multidrug efflux system in Campylobacter jejuni.Length (amino acid):
1040Reference: Lin et al. 2002; Pubmed- 12069965, Pumbwe et al. 2004; Pubmed- 15201231
| Similar
resistance genes in 'BacMet Predicted database' |
cmeC | BacMet ID: BAC0614Code for:
EffluxFamily: RND superfamily, OMF familySequence: FASTACross-database IDs: LinkOrganism: Campylobacter jejuniLocation:
ChromosomeCompound: Copper (Cu), Cobalt (Co), Sodium Chenodeoxycholate [class: Acid], Sodium Deoxycholate [class: Acid], Sodium Cholate [class: Acid], Sodium Taurocholate [class: Acid], Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate], Ethidium Bromide [class: Phenanthridine] Description: An outer membrane protein (CmeC). Part of the CmeABC multidrug efflux system in Campylobacter jejuni.Length (amino acid):
492Reference: Lin et al. 2002; Pubmed- 12069966
| Similar
resistance genes in 'BacMet Predicted database' |
cmeD | BacMet ID: BAC0615Code for:
EffluxFamily: RND superfamily, OMF familySequence: FASTACross-database IDs: LinkOrganism: Campylobacter jejuniLocation:
ChromosomeCompound: Ethidium Bromide [class: Phenanthridine], Acriflavine [class: Acridine], Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate], Triton X-100 [class: Polyethylene glycol], Tween 20 [class: Polyoxyethylene], Empigen [class: Amine betaine], Sodium Cholate [class: Acid], Sodium Glycocholate [class: Acid], Sodium Taurocholate [class: Acid], Sodium Deoxycholate (SDC) [class: Acid], Sodium Chenodeoxycholate [class: Acid]Description: CmeD is the outer membrane protein.Length (amino acid):
424Reference: Akiba et al. 2006, Pubmed- 16303882
| Similar
resistance genes in 'BacMet Predicted database' |
cmeE | BacMet ID: BAC0616Code for:
EffluxFamily: RND superfamilySequence: FASTACross-database IDs: LinkOrganism: Campylobacter jejuniLocation:
ChromosomeCompound: Ethidium Bromide [class: Phenanthridine], Acriflavine [class: Acridine], Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate], Triton X-100 [class: Polyethylene glycol], Tween 20 [class: Polyoxyethylene], Empigen [class: Amine betaine], Sodium Cholate [class: Acid], Sodium Glycocholate [class: Acid], Sodium Taurocholate [class: Acid], Sodium Deoxycholate (SDC) [class: Acid], Sodium Chenodeoxycholate [class: Acid]Description: CmeE is a periplasmic fusion proteinLength (amino acid):
246Reference: Akiba et al. 2006, Pubmed- 16303882
| Similar
resistance genes in 'BacMet Predicted database' |
cmeF | BacMet ID: BAC0069Code for:
EffluxFamily: RND superfamily; AcrB/AcrD/AcrF familySequence: FASTACross-database IDs: LinkOrganism: Campylobacter jejuniLocation:
ChromosomeCompound: Ethidium Bromide [class: Phenanthridine], Acriflavine [class: Acridine], Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate], Triton X-100 [class: Polyethylene glycol], Tween 20 [class: Polyoxyethylene], Empigen [class: Amine betaine], Sodium Cholate [class: Acid], Sodium Glycocholate [class: Acid], Sodium Taurocholate [class: Acid], Sodium Deoxycholate (SDC) [class: Acid], Sodium Chenodeoxycholate [class: Acid]Description: Integral membrane component of efflux system (Multidrug efflux system CmeDEF)Length (amino acid):
1005Reference: Akiba et al. 2006, Pubmed- 16303882
| Similar
resistance genes in 'BacMet Predicted database' |
cmeR | BacMet ID: BAC0070Code for:
RegulatorFamily: TetR familySequence: FASTACross-database IDs: LinkOrganism: Campylobacter jejuni 81-176Location:
ChromosomeCompound: Sodium Cholate [class: Acid]Description: Transcriptional repressor. CmeABC is controlled by CmeR, a transcriptional repressor encoded by a gene located immediately upstream of cmeABC. CmeR binds to the inverted repeat in the promoter region of cmeABC and inhibits the expression of the efflux operon.Length (amino acid):
210Reference: Lin et al. 2005; Pubmed- 15728904
| Similar
resistance genes in 'BacMet Predicted database' |
kexD | BacMet ID: BAC0492Code for:
EfffluxFamily: Restriction Nodulation Division (RND) superfamilySequence: FASTACross-database IDs: LinkOrganism: Klebsiella pneumoniaeLocation:
ChromosomeCompound: Rhodamine 6G [class: Xanthene], Tetraphenylphosphonium (TPP) [class: Quaternary Ammonium Compounds (QACs)], Ethidium Bromide [class: Phenanthridine], Sodium Cholate [class: Acid], Sodium Deoxycholate (SDC) [class: Acid] Description: KexD was shown to function with AcrAEc and TolC from E. coli and AcrAKp and KocC from K. pneumoniae, like AcrD from E. coliLength (amino acid):
1038Reference: Ogawa et al. 2012; Pubmed- 22391093
| Similar
resistance genes in 'BacMet Predicted database' |
mtrE | BacMet ID: BAC0259Code for:
EffluxFamily: RND Superfamily, OMP familySequence: FASTACross-database IDs: LinkOrganism: Neisseria gonorrhoeae (strain NCCP11945)Location:
ChromosomeCompound: Triton X-100 [class: Polyethylene glycol], Sodium Cholate [class: Acid]Description: Antibiotic resistance efflux pump component ; Outer membrane protein mtrE; part of MtrCDE efflux pumpLength (amino acid):
467Reference: Delahay et al. 1997; Pubmed- 9245802, Hagman et al. 1995; Pubmed- 7711899, Lucas et al. 1995; Pubmed- 7476176
| Similar
resistance genes in 'BacMet Predicted database' |
tolC | BacMet ID: BAC0393Code for:
EffluxFamily: RND Superfamily, OMP familySequence: FASTACross-database IDs: LinkOrganism: Escherichia coli (strain K12)Location:
ChromosomeCompound: Phenol [class: Phenolic compounds], Triclosan [class: Phenolic compounds], Sodium Deoxycholate (SDC) [class: Acid], Sodium Cholate [class: Acid], Sodium Taurodeoxycholate [class: Acid], Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate], Proflavin [class: Acridine], Acriflavine [class: Acridine], Ethidium Bromide [class: Phenanthridine], Tetraphenylphosphonium (TPP) [class: Quaternary Ammonium Compounds (QACs)], Rhodamine 6G [class: Xanthene], Tetraphenylarsonium (TPA) [class: Quaternary Ammonium Compounds (QACs)], Cetrimide (CTM) [class: Quaternary Ammonium Compounds (QACs)], Dequalinium [class: Quaternary Ammonium Compounds (QACs)], Benzylkonium Chloride (BAC) [class: Quaternary Ammonium Compounds (QACs)], Plumbagin [class: Naphthoquinone]Description: Required for proper expression of outer membrane protein genes such as ompF, nmpC, protein 2, hemolysin, colicin V, or colicin E1. May be specialized for signal sequence independent, extracellular secretion in Gram-negative bacteria. Required for acrAB, mar efflux pumps to act as multidrug efflux pump.Length (amino acid):
493Reference: Hackett et al. 1983; Pubmed- 6312426, Fralick et al. 1996; Pubmed- 8824631, Sulavik et al. 2001; Pubmed- 11257026
| Similar
resistance genes in 'BacMet Predicted database' |
vexH | BacMet ID: BAC0509Code for:
EffluxFamily: RND superfamilySequence: FASTACross-database IDs: LinkOrganism: Vibrio cholerae serotype O1Location:
ChromosomeCompound: Triton X-100 [class: Polyethylene glycol], Sodium Cholate [class: Acid], Sodium Deoxycholate (SDC) [class: Acid] Description: VexH contributes to antimicrobial resistance and exhibits broad substrate specificity. VexH is important for intestinal colonization and virulence factor production. V. cholerae RND efflux pumps (e.g. vexAB, vexCD etc.) have redundant functions, not only in antimicrobial resistance, but also in virulence factor production. RND efflux system contribute to V. cholerae pathogenesis in two ways. First, the RND efflux systems function to provide the bacterium with protection against antimicrobial compounds that are present in the host. Second, the RND efflux systems are required for efficient production of virulence factors. VexH can confer resistance to antibitics such as ampicillin and novobiocin.Length (amino acid):
1036Reference: Taylor et al. 2012; Pubmed- 22666485
| Similar
resistance genes in 'BacMet Predicted database' |
vmeC | BacMet ID: BAC0510Code for:
EffluxFamily: RND superfamilySequence: FASTACross-database IDs: LinkOrganism: Vibrio parahaemolyticus RIMD2210633Location:
ChromosomeCompound: Sodium Glycocholate [class: Acid], Sodium Taurocholate [class: Acid], Sodium Deoxycholate (SDC) [class: Acid], Sodium Cholate [class: Acid], Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate], Rhodamine 6G [class: Xanthene], Benzylkonium Chloride (BAC) [class: Quaternary Ammonium Compounds (QACs)], Chlorhexidine [class: Biguanides], Ethidium Bromide [class: Phenanthridine], Acriflavine [class: Acridine], Tetraphenylphosphonium (TPP) [class: Quaternary Ammonium Compounds (QACs)], Hoechst 33342 [class: Bisbenzimide]Description: VmeCD uses a outer memberane protein such as TolC in E. coli or TolC-like VpoC in V. parahaemolyticus to function properly but complexes with VpoC can extrude various antimicrobial agents more effectively than complexes with TolC.Length (amino acid):
368Reference: Matsuo et al. 2013; Pubmed- 23894076
| Similar
resistance genes in 'BacMet Predicted database' |
vmeD | BacMet ID: BAC0511Code for:
EffluxFamily: RND superfamilySequence: FASTACross-database IDs: LinkOrganism: Vibrio parahaemolyticus RIMD2210633Location:
ChromosomeCompound: Sodium Glycocholate [class: Acid], Sodium Taurocholate [class: Acid], Sodium Deoxycholate (SDC) [class: Acid], Sodium Cholate [class: Acid], Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate], Rhodamine 6G [class: Xanthene], Benzylkonium Chloride (BAC) [class: Quaternary Ammonium Compounds (QACs)], Chlorhexidine [class: Biguanides], Ethidium Bromide [class: Phenanthridine], Acriflavine [class: Acridine], Tetraphenylphosphonium (TPP) [class: Quaternary Ammonium Compounds (QACs)], Hoechst 33342 [class: Bisbenzimide]Description: VmeCD uses a outer memberane protein such as TolC in E. coli or TolC-like VpoC in V. parahaemolyticus to function properly but complexes with VpoC can extrude various antimicrobial agents more effectively than complexes with TolC.Length (amino acid):
1040Reference: Matsuo et al. 2013; Pubmed- 23894076
| Similar
resistance genes in 'BacMet Predicted database' |
vmeE | BacMet ID: BAC0512Code for:
EffluxFamily: RND superfamilySequence: FASTACross-database IDs: LinkOrganism: Vibrio parahaemolyticus RIMD2210633Location:
ChromosomeCompound: Ethidium Bromide [class: Phenanthridine], Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate], Sodium Cholate [class: Acid], Sodium Deoxycholate (SDC) [class: Acid], Sodium Glycocholate [class: Acid], Acriflavine [class: Acridine]Description: VmeEF uses a outer memberane protein such as TolC in E. coli or TolC-like VpoC in V. parahaemolyticus to function properly but complexes with VpoC can extrude various antimicrobial agents more effectively than complexes with TolC.Length (amino acid):
364Reference: Matsuo et al. 2013; Pubmed- 23894076
| Similar
resistance genes in 'BacMet Predicted database' |
vmeF | BacMet ID: BAC0513Code for:
EffluxFamily: RND superfamilySequence: FASTACross-database IDs: LinkOrganism: Vibrio parahaemolyticus RIMD2210633Location:
ChromosomeCompound: Ethidium Bromide [class: Phenanthridine], Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate], Sodium Cholate [class: Acid], Sodium Deoxycholate (SDC) [class: Acid], Sodium Glycocholate [class: Acid], Acriflavine [class: Acridine]Description: VmeEF uses a outer memberane protein such as TolC in E. coli or TolC-like VpoC in V. parahaemolyticus to function properly but complexes with VpoC can extrude various antimicrobial agents more effectively than complexes with TolC.Length (amino acid):
1037Reference: Matsuo et al. 2013; Pubmed- 23894076
| Similar
resistance genes in 'BacMet Predicted database' |
vmeG | BacMet ID: BAC0517Code for:
EffluxFamily: RND superfamilySequence: FASTACross-database IDs: LinkOrganism: Vibrio parahaemolyticus RIMD2210633Location:
ChromosomeCompound: Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate], Sodium Cholate [class: Acid], Sodium Deoxycholate (SDC) [class: Acid], Sodium Glycocholate [class: Acid], Ethidium Bromide [class: Phenanthridine], Benzylkonium Chloride (BAC) [class: Quaternary Ammonium Compounds (QACs)], Chlorhexidine [class: Biguanides]Description: Part of VexGHI efflux transporter.Length (amino acid):
343Reference: Matsuo et al. 2013; Pubmed- 23894076
| Similar
resistance genes in 'BacMet Predicted database' |
vmeH | BacMet ID: BAC0518Code for:
EffluxFamily: RND superfamilySequence: FASTACross-database IDs: LinkOrganism: Vibrio parahaemolyticus RIMD2210633Location:
ChromosomeCompound: Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate], Sodium Cholate [class: Acid], Sodium Deoxycholate (SDC) [class: Acid], Sodium Glycocholate [class: Acid], Ethidium Bromide [class: Phenanthridine], Benzylkonium Chloride (BAC) [class: Quaternary Ammonium Compounds (QACs)], Chlorhexidine [class: Biguanides]Description: Part of VexGHI efflux transporter.Length (amino acid):
361Reference: Matsuo et al. 2013; Pubmed- 23894076
| Similar
resistance genes in 'BacMet Predicted database' |
vmeI | BacMet ID: BAC0519Code for:
EffluxFamily: RND superfamilySequence: FASTACross-database IDs: LinkOrganism: Vibrio parahaemolyticus RIMD2210633Location:
ChromosomeCompound: Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate], Sodium Cholate [class: Acid], Sodium Deoxycholate (SDC) [class: Acid], Sodium Glycocholate [class: Acid], Ethidium Bromide [class: Phenanthridine], Benzylkonium Chloride (BAC) [class: Quaternary Ammonium Compounds (QACs)], Chlorhexidine [class: Biguanides]Description: Part of VexGHI efflux transporter.Length (amino acid):
1033Reference: Matsuo et al. 2013; Pubmed- 23894076
| Similar
resistance genes in 'BacMet Predicted database' |
vmeP | BacMet ID: BAC0522Code for:
EffluxFamily: RND superfamilySequence: FASTACross-database IDs: LinkOrganism: Vibrio parahaemolyticus RIMD2210633Location:
ChromosomeCompound: Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate], Sodium Cholate [class: Acid], Sodium Deoxycholate (SDC) [class: Acid], Sodium Glycocholate [class: Acid]Description: Part of the VexPQ efflux transpporter. VexPQ VexGHI uses a outer memberane protein such as TolC in E. coli or TolC-like VpoC in V. parahaemolyticus to function properly but complexes with VpoC can extrude various antimicrobial agents more effectively than complexes.Length (amino acid):
380Reference: Matsuo et al. 2013; Pubmed- 23894076
| Similar
resistance genes in 'BacMet Predicted database' |
vmeQ | BacMet ID: BAC0523Code for:
EffluxFamily: RND superfamilySequence: FASTACross-database IDs: LinkOrganism: Vibrio parahaemolyticus RIMD2210633Location:
ChromosomeCompound: Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate], Sodium Cholate [class: Acid], Sodium Deoxycholate (SDC) [class: Acid], Sodium Glycocholate [class: Acid]Description: Part of the VexPQ efflux transpporter. VexPQ VexGHI uses a outer memberane protein such as TolC in E. coli or TolC-like VpoC in V. parahaemolyticus to function properly but complexes with VpoC can extrude various antimicrobial agents more effectively than complexes.Length (amino acid):
1046Reference: Matsuo et al. 2013; Pubmed- 23894076
| Similar
resistance genes in 'BacMet Predicted database' |
vmeT | BacMet ID: BAC0524Code for:
EffluxFamily: RND superfamilySequence: FASTACross-database IDs: LinkOrganism: Vibrio parahaemolyticus RIMD2210633Location:
ChromosomeCompound: Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate], Sodium Cholate [class: Acid], Sodium Deoxycholate (SDC) [class: Acid], Sodium Glycocholate [class: Acid], Ethidium Bromide [class: Phenanthridine], Benzylkonium Chloride (BAC) [class: Quaternary Ammonium Compounds (QACs)], Chlorhexidine [class: Biguanides], Acriflavine [class: Acridine], Tetraphenylphosphonium (TPP) [class: Quaternary Ammonium Compounds (QACs)]Description: Part of the VexTUV efflux transporter.Length (amino acid):
361Reference: Matsuo et al. 2013; Pubmed- 23894076
| Similar
resistance genes in 'BacMet Predicted database' |
vmeU | BacMet ID: BAC0525Code for:
EffluxFamily: RND superfamilySequence: FASTACross-database IDs: LinkOrganism: Vibrio parahaemolyticus RIMD2210633Location:
ChromosomeCompound: Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate], Sodium Cholate [class: Acid], Sodium Deoxycholate (SDC) [class: Acid], Sodium Glycocholate [class: Acid], Ethidium Bromide [class: Phenanthridine], Benzylkonium Chloride (BAC) [class: Quaternary Ammonium Compounds (QACs)], Chlorhexidine [class: Biguanides], Acriflavine [class: Acridine], Tetraphenylphosphonium (TPP) [class: Quaternary Ammonium Compounds (QACs)]Description: Part of the VexTUV efflux transporter.Length (amino acid):
353Reference: Matsuo et al. 2013; Pubmed- 23894076
| Similar
resistance genes in 'BacMet Predicted database' |
vmeV | BacMet ID: BAC0526Code for:
EffluxFamily: RND superfamilySequence: FASTACross-database IDs: LinkOrganism: Vibrio parahaemolyticus RIMD2210633Location:
ChromosomeCompound: Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate], Sodium Cholate [class: Acid], Sodium Deoxycholate (SDC) [class: Acid], Sodium Glycocholate [class: Acid], Ethidium Bromide [class: Phenanthridine], Benzylkonium Chloride (BAC) [class: Quaternary Ammonium Compounds (QACs)], Chlorhexidine [class: Biguanides], Acriflavine [class: Acridine], Tetraphenylphosphonium (TPP) [class: Quaternary Ammonium Compounds (QACs)]Description: Part of the VexTUV efflux transporter.Length (amino acid):
1019Reference: Matsuo et al. 2013; Pubmed- 23894076
| Similar
resistance genes in 'BacMet Predicted database' |
vmeY | BacMet ID: BAC0514Code for:
EffluxFamily: RND superfamilySequence: FASTACross-database IDs: LinkOrganism: Vibrio parahaemolyticus RIMD2210633Location:
ChromosomeCompound: Sodium Glycocholate [class: Acid], Sodium Taurocholate [class: Acid], Sodium Deoxycholate (SDC) [class: Acid], Sodium Cholate [class: Acid], Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate]Description: Part of the VexYZ efflux transporter. VmeYZ uses a outer memberane protein such as TolC in E. coli or TolC-like VpoC in V. parahaemolyticus to function properly but complexes with VpoC can extrude various antimicrobial agents more effectively than complexes with TolC.Length (amino acid):
375Reference: Matsuo et al. 2013; Pubmed- 23894076
| Similar
resistance genes in 'BacMet Predicted database' |
vmeZ | BacMet ID: BAC0515Code for:
EffluxFamily: RND superfamilySequence: FASTACross-database IDs: LinkOrganism: Vibrio parahaemolyticus RIMD2210633Location:
ChromosomeCompound: Sodium Glycocholate [class: Acid], Sodium Taurocholate [class: Acid], Sodium Deoxycholate (SDC) [class: Acid], Sodium Cholate [class: Acid], Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate]Description: Part of the VexYZ efflux transporter. VmeYZ uses a outer memberane protein such as TolC in E. coli or TolC-like VpoC in V. parahaemolyticus to function properly but complexes with VpoC can extrude various antimicrobial agents more effectively than complexes with TolC.Length (amino acid):
1050Reference: Matsuo et al. 2013; Pubmed- 23894076
| Similar
resistance genes in 'BacMet Predicted database' |
vpoC | BacMet ID: BAC0516Code for:
EffluxFamily: RND superfamily, OMP familySequence: FASTACross-database IDs: LinkOrganism: Vibrio parahaemolyticus RIMD2210633Location:
ChromosomeCompound: Benzylkonium Chloride (BAC) [class: Quaternary Ammonium Compounds (QACs)], Chlorhexidine [class: Biguanides], Ethidium Bromide [class: Phenanthridine], Rhodamine 6G [class: Xanthene], Acriflavine [class: Acridine], Tetraphenylphosphonium (TPP) [class: Quaternary Ammonium Compounds (QACs)], Hoechst 33342 [class: Bisbenzimide], Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate], Sodium Cholate [class: Acid], Sodium Deoxycholate (SDC) [class: Acid], Sodium Glycocholate [class: Acid]Description: Homologue of E. coli TolC outer membrane protein, vpoC.Length (amino acid):
442Reference: Matsuo et al. 2013; Pubmed- 23894076
| Similar
resistance genes in 'BacMet Predicted database' |